Actinobacterial bacteria. These genes are often clustered withone or both types of whiJ-associated genes. Most mycelial actinomycetes have two or three WhiJ paralogues, but K. setae has five, and all streptomycetes have more than 10, sometimes more than 20. Phylogenetic analysis of WhiJ paralogues from four well-studied streptomycetes is shown in Fig. 7. The branching pattern is consistent with un
Actinobacterial bacteria. These genes are often clustered withone or both types of whiJ-associated genes. Most mycelial actinomycetes have two or three WhiJ paralogues, but K. setae has five, and all streptomycetes have more than 10, sometimes more than 20. Phylogenetic analysis of WhiJ paralogues from four well-studied streptomycetes is shown in Fig. 7. The branching pattern is consistent with un
Tively long-established clusters. Twelve other S. coelicolor whiJ-like genes were represented in around half of streptomycetes (SCO2381*, 2865, 2869*, 3365*, 4176, 4301, 4678, 4998, 6129, 6537, 6629*, 7579) [asterisks indicate occurrence also in some other complex actinomycete(s)]; while seven others were found in four or fewer streptomycetes (SCO0704, 2246, 2253, 4543, 5125,Fig. 7. Phylogenetic a
Stars); S. venezuelae (yellow squares)] and Thermobifida fusca (brown crosses). The tree represents a phylogenetic analysis using PHYLIP (Felsenstein, 1989, 2005).FEMS Microbiol Rev 38 (2014) 345??2013 The Author. FEMS Microbiology Reviews published by John Wiley Sons Ltd on behalf of the Federation of European Microbiological SocietiesG. Chandra K.F. Chater6003, 7615). TTA codons were not ass
Stars); S. venezuelae (yellow squares)] and Thermobifida fusca (brown crosses). The tree represents a phylogenetic analysis using PHYLIP (Felsenstein, 1989, 2005).FEMS Microbiol Rev 38 (2014) 345??2013 The Author. FEMS Microbiology Reviews published by John Wiley Sons Ltd on behalf of the Federation of European Microbiological SocietiesG. Chandra K.F. Chater6003, 7615). TTA codons were not ass
Stars); S. venezuelae (yellow squares)] and Thermobifida fusca (brown crosses). The tree represents a phylogenetic analysis using PHYLIP (Felsenstein, 1989, 2005).FEMS Microbiol Rev 38 (2014) 345??2013 The Author. FEMS Microbiology Reviews published by John Wiley Sons Ltd on behalf of the Federation of European Microbiological SocietiesG. Chandra K.F. Chater6003, 7615). TTA codons were not ass
Licolor is the whiJ gene (SCO4543) for a deduced DNA-binding protein (Gehring et al., 2000; Ainsa et al., 2010). Most of the 24 paralogues of whiJ in the S. coelicolor chromosome are associated with one or both of two kinds of immediately neighbouring genes, one kind encoding very small DNA-binding proteins (i.e. like SCO4542) and the other encoding proteins with features like antisigma factors (e
Licolor is the whiJ gene (SCO4543) for a deduced DNA-binding protein (Gehring et al., 2000; Ainsa et al., 2010). Most of the 24 paralogues of whiJ in the S. coelicolor chromosome are associated with one or both of two kinds of immediately neighbouring genes, one kind encoding very small DNA-binding proteins (i.e. like SCO4542) and the other encoding proteins with features like antisigma factors (e